Research References

Benjamin Brock, Aydın Buluç, and Katherine Yelick. 2019. BCL: A Cross-Platform Distributed Data Structures Library. In Proceedings of the 48th International Conference on Parallel Processing (ICPP 2019). Association for Computing Machinery, New York, NY, USA, Article 102, 1–10. DOI:https://doi.org/10.1145/3337821.3337912

Did (https://math.stackexchange.com/users/6179/did). Finding expected number of distinct values selected from a set of integers. Mathematics Stack Exchange. URL:https://math.stackexchange.com/q/72229 (version: 2017-07-20).

Guillaume Marçais, Dan DeBlasio, Prashant Pandey, Carl Kingsford, Locality-sensitive hashing for the edit distance, Bioinformatics, Volume 35, Issue 14, July 2019, Pages i127–i135, https://doi.org/10.1093/bioinformatics/btz354

Langmead BT and Baker D. Genomic sketching with HyperLogLog [version 1; not peer reviewed]. F1000Research 2019, 8:1866 (slides) (https://doi.org/10.7490/f1000research.1117605.1)

Rowe, W.P.M. When the levee breaks: a practical guide to sketching algorithms for processing the flood of genomic data. Genome Biol 20, 199 (2019) doi:10.1186/s13059-019-1809-x

Ondov, B.D., Treangen, T.J., Melsted, P. et al. Mash: fast genome and metagenome distance estimation using MinHash. Genome Biol 17, 132 (2016) doi:10.1186/s13059-016-0997-x